STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
artJArginine transport system periplasmic binding protein; Belongs to the bacterial solute-binding protein 3 family. (244 aa)    
Predicted Functional Partners:
Lrub_2389
Amino acid (glutamine) ABC transporter permease.
 0.927
Lrub_2390
Amino acid (glutamine) ABC transporter ATP binding protein.
 
 0.875
smc_4
Chromosome partition protein Smc.
    
 0.707
gacS/letS
Transmission sensor LetS.
   
 0.676
yqiX
Amino acid (glutamine) ABC transporter periplasmic amino acid binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
    
0.640
Lrub_0131
Regulatory protein (GGDEF and EAL domains).
   
 0.606
Lrub_0166
Sensory box histidine kinase/response regulator.
    
 0.590
Lrub_2598
Hypothetical protein.
       0.586
Lrub_0394
Sensor histidine kinase.
   
 0.584
stuC_1
Sensor histidine kinase.
    
 0.571
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.