STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_2602Phosphotransferase enzyme family protein. (324 aa)    
Predicted Functional Partners:
sidB
Substrate of the Dot/Icm system.
  
     0.723
Lrub_2448
Osmotically inducible protein Y.
  
     0.671
Lrub_2358
Hypothetical protein.
  
     0.541
Lrub_0363
Haloacid dehalogenase-like hydrolase.
  
  
  0.508
brnQ
Branched-chain amino acid transport system 2 carrier protein; Component of the transport system for branched-chain amino acids.
  
     0.508
Lrub_2726
GNAT family acetyltransferase.
  
     0.474
Lrub_2307
Putative DNA-binding transcriptional regulator.
  
  
  0.469
Lrub_1765
Flagellar hook-length control protein FliK.
  
    0.465
lysAC
Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.458
Lrub_1507
N-acetyltransferase GCN5.
  
     0.451
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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