Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lrub_2612Putative DNA-binding protein hemimethylated. (103 aa)    
Predicted Functional Partners:
Lrub_2611
Hypothetical protein.
       0.750
iraA
Small-molecule methyltransferase IraA.
  
     0.603
Lrub_2783
Hypothetical protein.
  
     0.543
Lrub_2608
Putative helicase/relaxase.
  
     0.510
tatC
Sec-independent (periplasmic) protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
       0.475
Lrub_1753
Hypothetical protein.
  
     0.466
Lrub_2378
Hypothetical protein.
  
     0.441
yjeA
Endo-1,4-beta-xylanase.
  
     0.421
Lrub_1809
Hypothetical protein.
  
     0.421
Lrub_1263
Hypothetical protein.
  
     0.420
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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