STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lasBVirulence metalloprotease; Extracellular zinc metalloprotease. (558 aa)    
Predicted Functional Partners:
proA
Zinc metalloproteinase precursor; Extracellular zinc metalloprotease.
  
  
 
0.879
Lrub_0931
Serine metalloprotease; Belongs to the peptidase S8 family.
 
  
 0.703
Lrub_1911
Hemagglutinin/protease, zinc metalloprotease; Extracellular zinc metalloprotease.
  
  
 
0.610
Lrub_2635
Hypothetical protein.
       0.608
Lrub_2661
Metalloproteinase-like protein.
 
 
 0.588
Lrub_0695
Hypothetical protein.
 
 
 0.584
tphB
Proline/glycine betaine transporter-like protein.
       0.579
Lrub_0694
Hypothetical protein.
   
 0.531
Lrub_1458
PAP2 superfamily protein.
   
 0.531
Lrub_2313
Hypothetical protein.
   
 0.531
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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