Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lrub_2654Hemolysin, lipoprotein. (196 aa)    
Predicted Functional Partners:
yraO
DnaA initiator-associating factor for replication initiation.
  
    0.906
Lrub_2655
Conserved hypothetical protein; putative periplasmic or secreted lipoprotein.
 
    
0.896
Lrub_2657
Hypothetical protein; Belongs to the UPF0102 family.
       0.841
Lrub_2658
Lipoprotein.
  
    0.780
rsmI
Tetrapyrrole (corrin/porphyrin) methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.693
Lrub_1330
Transmembrane protein.
  
    0.612
yjbJ_1
Stress response protein; Belongs to the UPF0337 (CsbD) family.
  
    0.483
yjbJ_2
Stress response protein; Belongs to the UPF0337 (CsbD) family.
  
    0.483
rlpB
Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.
  
    0.459
lptC
Lipopolysaccharide export system protein LptC.
  
    0.410
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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