STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wrbA_2Flavoprotein WrbA (Trp repressor binding protein). (199 aa)    
Predicted Functional Partners:
Lrub_2682
Pirin-like protein; Belongs to the pirin family.
       0.768
wrbA_1
Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.
  
  
 
0.596
Lrub_1088
DNA-binding protein; Belongs to the Dps family.
   
  
 0.585
Lrub_2684
Integral membrane protein.
       0.543
rlmL
Ribosomal RNA large subunit methyltransferase L; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.
       0.524
Lrub_0759
Hypothetical protein.
   
    0.518
Lrub_1829
Hypothetical protein.
   
    0.518
Lrub_2681
Dot/Icm secretion system substrate.
       0.513
Lrub_1749
LysM domain-containing protein.
   
  
 0.512
Lrub_1614
Serine protein kinase.
   
    0.468
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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