STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_2689Putative membrane fusion protein. (328 aa)    
Predicted Functional Partners:
Lrub_2690
Toxin secretion ABC transporter ATP-binding protein.
  0.982
Lrub_2688
Outer membrane component of multidrug efflux pump.
 
  0.981
Lrub_2693
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.844
Lrub_2691
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.843
Lrub_2694
Hypothetical protein.
 
     0.789
Lrub_2692
NADH-ubiquinone oxidoreductase chain 5.
 
     0.754
cecC
Chemiosmotic efflux system C protein C.
  
  0.670
Lrub_1564
Hypothetical protein.
  
     0.626
Lrub_2724
ABC transporter permease.
  
  
 0.565
Lrub_0735
Hypothetical protein.
  
     0.540
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.