Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
Lrub_2691LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (283 aa)    
Predicted Functional Partners:
Lrub_2688
Outer membrane component of multidrug efflux pump.
 
     0.867
Lrub_2690
Toxin secretion ABC transporter ATP-binding protein.
 
     0.852
Lrub_2689
Putative membrane fusion protein.
 
     0.843
Lrub_2692
NADH-ubiquinone oxidoreductase chain 5.
 
     0.798
Lrub_2694
Hypothetical protein.
 
     0.793
Lrub_2693
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.792
rpoA
DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.555
Lrub_0743
Membrane protein.
  
     0.544
Lrub_0745
TraU protein.
  
     0.526
Lrub_0750
Hypothetical protein.
  
     0.517
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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