STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_2695Transmembrane protein. (179 aa)    
Predicted Functional Partners:
pagP
Lipid A palmitoyltransferase PagP precursor; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.
       0.648
hbp
Hemin binding protein.
       0.644
Lrub_2696
3-methyladenine DNA glycosylase.
  
    0.600
Lrub_1611
Aminopeptidase.
  
     0.583
Lrub_2699
Amino acid transporter PotE.
       0.577
Lrub_1381
Glucoamylase.
  
     0.501
Lrub_0242
Hydrolase/acyltransferase.
  
     0.468
gacS/letS
Transmission sensor LetS.
  
     0.418
Lrub_2561
Glutamine amidotransferase.
  
     0.406
Lrub_0901
Putative glutamate synthase subunit beta.
  
     0.400
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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