STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_2722Membrane-fusion protein AcrA. (380 aa)    
Predicted Functional Partners:
Lrub_2721
Outer membrane efflux protein.
 
  0.978
Lrub_2724
ABC transporter permease.
 
   0.932
Lrub_2723
ABC transporter ATP-binding protein.
 
   0.926
ubiH_2
2-polyprenyl-6-methoxyphenol hydroxylase.
       0.779
Lrub_2718
Xaa-Pro aminopeptidase.
       0.771
ubiH_1
2-octaprenyl-6-methoxyphenol hydroxylase.
       0.771
Lrub_2608
Putative helicase/relaxase.
 
  
  0.720
Lrub_2717
Hypothetical protein; Belongs to the UPF0149 family.
 
     0.705
Lrub_1044
Outer membrane protein TolC.
 
 0.700
Lrub_1404
Outer membrane efflux protein.
  
 0.691
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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