Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| coxB | cydA | Lrub_2763 | Lrub_2727 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome d ubiquinol oxidase subunit I. | 0.492 |
| coxB | cydB | Lrub_2763 | Lrub_2728 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome d ubiquinol oxidase subunit II. | 0.405 |
| coxB | qxtA | Lrub_2763 | Lrub_1959 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome d ubiquinol oxidase subunit I. | 0.492 |
| coxB | qxtB | Lrub_2763 | Lrub_1960 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome d ubiquinol oxidase subunit II. | 0.405 |
| coxB | sdhA_1 | Lrub_2763 | Lrub_1685 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.683 |
| coxB | sdhB | Lrub_2763 | Lrub_1686 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Succinate dehydrogenase iron-sulfur subunit. | 0.983 |
| coxB | sdhC | Lrub_2763 | Lrub_1683 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Succinate dehydrogenase, cytochrome b556 subunit. | 0.871 |
| cydA | coxB | Lrub_2727 | Lrub_2763 | Cytochrome d ubiquinol oxidase subunit I. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.492 |
| cydA | cydB | Lrub_2727 | Lrub_2728 | Cytochrome d ubiquinol oxidase subunit I. | Cytochrome d ubiquinol oxidase subunit II. | 0.999 |
| cydA | qxtA | Lrub_2727 | Lrub_1959 | Cytochrome d ubiquinol oxidase subunit I. | Cytochrome d ubiquinol oxidase subunit I. | 0.726 |
| cydA | qxtB | Lrub_2727 | Lrub_1960 | Cytochrome d ubiquinol oxidase subunit I. | Cytochrome d ubiquinol oxidase subunit II. | 0.984 |
| cydA | sdhA_1 | Lrub_2727 | Lrub_1685 | Cytochrome d ubiquinol oxidase subunit I. | Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.575 |
| cydA | sdhB | Lrub_2727 | Lrub_1686 | Cytochrome d ubiquinol oxidase subunit I. | Succinate dehydrogenase iron-sulfur subunit. | 0.575 |
| cydA | sdhC | Lrub_2727 | Lrub_1683 | Cytochrome d ubiquinol oxidase subunit I. | Succinate dehydrogenase, cytochrome b556 subunit. | 0.561 |
| cydB | coxB | Lrub_2728 | Lrub_2763 | Cytochrome d ubiquinol oxidase subunit II. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.405 |
| cydB | cydA | Lrub_2728 | Lrub_2727 | Cytochrome d ubiquinol oxidase subunit II. | Cytochrome d ubiquinol oxidase subunit I. | 0.999 |
| cydB | qxtA | Lrub_2728 | Lrub_1959 | Cytochrome d ubiquinol oxidase subunit II. | Cytochrome d ubiquinol oxidase subunit I. | 0.989 |
| cydB | qxtB | Lrub_2728 | Lrub_1960 | Cytochrome d ubiquinol oxidase subunit II. | Cytochrome d ubiquinol oxidase subunit II. | 0.613 |
| cydB | sdhA_1 | Lrub_2728 | Lrub_1685 | Cytochrome d ubiquinol oxidase subunit II. | Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.575 |
| cydB | sdhB | Lrub_2728 | Lrub_1686 | Cytochrome d ubiquinol oxidase subunit II. | Succinate dehydrogenase iron-sulfur subunit. | 0.575 |
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