STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tesAEsterase TesA precursor. (201 aa)    
Predicted Functional Partners:
Lrub_2740
FtsX-like permease family protein.
 
 
   0.984
Lrub_2741
ABC transporter ATP binding protein.
 
 
   0.961
Lrub_2706
Chitinase.
  
 0.629
celA
Endoglucanase A precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.629
Lrub_2743
Lytic murein transglycosylase.
       0.549
msrA
Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.522
Lrub_1458
PAP2 superfamily protein.
  
 
  0.449
fadD-1
Long chain fatty acid-CoA ligase.
 
   
 0.404
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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