Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lrub_2461 | ubiB | Lrub_2461 | Lrub_2750 | Oligoketide cyclase/lipid transporter protein. | Ubiquinone biosynthesis protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.499 |
| Lrub_2461 | ubiG_1 | Lrub_2461 | Lrub_0111 | Oligoketide cyclase/lipid transporter protein. | 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.497 |
| Lrub_2461 | ubiH_2 | Lrub_2461 | Lrub_2720 | Oligoketide cyclase/lipid transporter protein. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.555 |
| Lrub_2751 | Lrub_2753 | Lrub_2751 | Lrub_2753 | SCP-2 sterol transfer family protein. | Regulatory protein (GGDEF, PAS, PAC domains). | 0.485 |
| Lrub_2751 | tatA | Lrub_2751 | Lrub_2749 | SCP-2 sterol transfer family protein. | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.806 |
| Lrub_2751 | tatB | Lrub_2751 | Lrub_2748 | SCP-2 sterol transfer family protein. | TatB protein (twin arginine translocation). | 0.806 |
| Lrub_2751 | ubiB | Lrub_2751 | Lrub_2750 | SCP-2 sterol transfer family protein. | Ubiquinone biosynthesis protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.827 |
| Lrub_2751 | ubiE | Lrub_2751 | Lrub_2752 | SCP-2 sterol transfer family protein. | Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.863 |
| Lrub_2753 | Lrub_2751 | Lrub_2753 | Lrub_2751 | Regulatory protein (GGDEF, PAS, PAC domains). | SCP-2 sterol transfer family protein. | 0.485 |
| Lrub_2753 | stuC_1 | Lrub_2753 | Lrub_0438 | Regulatory protein (GGDEF, PAS, PAC domains). | Sensor histidine kinase. | 0.997 |
| Lrub_2753 | tatA | Lrub_2753 | Lrub_2749 | Regulatory protein (GGDEF, PAS, PAC domains). | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.485 |
| Lrub_2753 | tatB | Lrub_2753 | Lrub_2748 | Regulatory protein (GGDEF, PAS, PAC domains). | TatB protein (twin arginine translocation). | 0.485 |
| Lrub_2753 | ubiB | Lrub_2753 | Lrub_2750 | Regulatory protein (GGDEF, PAS, PAC domains). | Ubiquinone biosynthesis protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.494 |
| Lrub_2753 | ubiE | Lrub_2753 | Lrub_2752 | Regulatory protein (GGDEF, PAS, PAC domains). | Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.485 |
| stuC_1 | Lrub_2753 | Lrub_0438 | Lrub_2753 | Sensor histidine kinase. | Regulatory protein (GGDEF, PAS, PAC domains). | 0.997 |
| stuC_1 | ubiB | Lrub_0438 | Lrub_2750 | Sensor histidine kinase. | Ubiquinone biosynthesis protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.495 |
| tatA | Lrub_2751 | Lrub_2749 | Lrub_2751 | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | SCP-2 sterol transfer family protein. | 0.806 |
| tatA | Lrub_2753 | Lrub_2749 | Lrub_2753 | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Regulatory protein (GGDEF, PAS, PAC domains). | 0.485 |
| tatA | tatB | Lrub_2749 | Lrub_2748 | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | TatB protein (twin arginine translocation). | 0.800 |
| tatA | ubiB | Lrub_2749 | Lrub_2750 | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Ubiquinone biosynthesis protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.820 |
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