STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
celAEndoglucanase A precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (505 aa)    
Predicted Functional Partners:
Lrub_1372
Hypothetical protein.
   
 0.912
Lrub_2706
Chitinase.
 
0.870
Lrub_2824
Chitinase.
 
  
 0.795
Lrub_2209
GDSL-like Lipase/Acylhydrolase.
   
 0.629
tesA
Esterase TesA precursor.
   
 0.629
chiA1
Chitinase A1 precursor; Belongs to the glycosyl hydrolase 18 family.
  
  
  0.600
Lrub_0528
Glycosyltransferase, family 2.
    
 0.536
Lrub_0855
Endo-1,4 beta-glucanase.
     
 0.506
Lrub_0916
Sporulation domain-containing protein.
     
  0.433
iolCB
IolC/IolB transferase kinase protein.
     
  0.433
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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