STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_2802Methionine sulfoxide reductase B. (165 aa)    
Predicted Functional Partners:
msrA-2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.997
msrA
Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
0.970
merA1_2
Mercuric reductase.
       0.780
Lrub_1084
Thiol:disulfide interchange protein DsbD.
    
 
 0.742
Lrub_2127
Thiol:disulfide interchange protein DsbD.
    
 
 0.742
Lrub_2804
Cytochrome oxidase-like protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.682
Lrub_1670
Hypothetical protein.
   
 0.580
ccmG
Cytochrome C biogenesis protein.
   
 0.580
Lrub_2679
Thiol-disulfide oxidoreductase.
   
 0.580
Lrub_2800
Hypothetical protein; N-terminal GNAT family acetyltransferase.
       0.541
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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