Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lrub_2804Cytochrome oxidase-like protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (204 aa)    
Predicted Functional Partners:
merA1_2
Mercuric reductase.
 
     0.870
msrA-2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.798
Lrub_2802
Methionine sulfoxide reductase B.
       0.796
Lrub_0078
DNA-binding protein.
  
    0.761
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
    
 0.564
Lrub_2805
Avirulence protein.
       0.549
Lrub_2800
Hypothetical protein; N-terminal GNAT family acetyltransferase.
       0.519
Lrub_1438
2-acylglycerophosphoethanolamine acyltransferase.
  
 
 0.467
merA1_1
Mercuric reductase.
 
     0.463
cinA_1
Competence damage inducible protein CinA.
 
    0.455
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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