STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsbCThiol-disulfide oxidoreductase DsbC; Belongs to the DsbB family. (138 aa)    
Predicted Functional Partners:
dsbD
Thiol-disulfide oxidoreductase DsbD.
 
 
 0.975
MCCL_1212
Conserved hypothetical protein; Similar to cytochrome c550.
 
   
 0.588
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.568
MCCL_1124
Conserved hypothetical protein; Similar to functionally unknown protein.
 
     0.563
MCCL_0004
ABC-type Na+ efflux pump permease component.
       0.549
MCCL_0003
Na+ efflux pump, ATP-binding protein.
       0.546
MCCL_0568
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.527
ctaA
Cytochrome aa3 controlling protein homolog; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily.
 
  
 0.485
resB
Cytochrome c biogenesis protein ResB.
  
   
 0.462
MCCL_1089
Conserved hypothetical protein; Similar to functionally unknown protein.
 
     0.448
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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