STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0057Dehydrogenase family protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (316 aa)    
Predicted Functional Partners:
MCCL_0490
Conserved hypothetical protein; Similar to glycerate kinase.
    
 0.914
MCCL_1853
Hypothetical protein.
    
  0.902
pykA
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.672
MCCL_0058
Conserved hypothetical protein; Similar to 3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.621
katA
Catalase; Belongs to the catalase family.
  
    0.454
MCCL_1494
Conserved hypothetical protein; Similar to transaldolase.
 
 
 0.428
groES
Chaperonin GroES protein; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
 
 
 0.422
MCCL_1352
Conserved hypothetical protein; Similar to functionally unknown protein.
  
    0.403
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.