STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0058Conserved hypothetical protein; Similar to 3-hydroxyacyl-CoA dehydrogenase. (304 aa)    
Predicted Functional Partners:
aldA
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.927
MCCL_0131
Conserved hypothetical protein; Similar to functionally unknown protein.
 
 
 0.925
MCCL_1656
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.920
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).
     0.918
mmsB
3-hydroxyisobutyrate dehydrogenase.
     
 0.914
acsA
Acetyl-coenzyme A synthetase.
  
 
 0.902
MCCL_1833
Phosphotransacetylase.
    
 0.867
pflB
Formate acetyltransferase.
     
 0.827
menE
O-succinylbenzoic acid-CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.
 
  
 0.667
MCCL_0057
Dehydrogenase family protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.621
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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