STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0179Conserved hypothetical protein; Similar to cation multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1060 aa)    
Predicted Functional Partners:
MCCL_0311
Conserved hypothetical protein; Similar to functionally unknown protein.
  
 
 0.936
mmsB
3-hydroxyisobutyrate dehydrogenase.
       0.570
secDF
Protein translocase membrane protein SecDF subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
 
  
 0.520
MCCL_0180
Conserved hypothetical protein; Similar to aminotransferase family protein.
  
    0.512
MCCL_1472
Conserved hypothetical protein; Similar to transcriptional regulator, TetR family.
 
   
 0.455
MCCL_1552
Conserved hypothetical protein; Similar to transporter protein.
      
 0.422
MCCL_0177
Hypothetical protein.
       0.419
MCCL_0176
FmhB protein, methicillin resistant factor homolog.
       0.403
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.