STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0244Conserved hypothetical protein; Similar to functionally unknown protein. (180 aa)    
Predicted Functional Partners:
MCCL_0186
Glucose-1-dehydrogenase homolog.
  
 
 0.647
MCCL_1630
Short-chain dehydrogenase/reductase family protein.
  
 
 0.628
glgC
Glucose-1-phosphate adenylyltransferase homolog; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
    0.600
glgD
Glycogen biosynthesis homolog.
   
    0.600
MCCL_0090
Short-chain dehydrogenase/reductase family protein.
   
 
 0.580
MCCL_0412
Conserved hypothetical protein; Similar to short-chain dehydrogenase/reductase SDR.
   
 
 0.580
MCCL_0425
Dehydrogenase.
   
 
 0.580
fabG
3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.580
MCCL_0871
Conserved hypothetical protein; Similar to short chain dehydrogenase.
   
 
 0.580
MCCL_1045
Conserved hypothetical protein; Similar to short-chain dehydrogenase/reductase SDR.
   
 
 0.580
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.