STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0258Truncated sulfate permease family protein. (384 aa)    
Predicted Functional Partners:
MCCL_0259
Conserved hypothetical protein; Similar to universal stress protein family.
  
    0.806
qcrC
Menaquinol-cytochrome c reductase cytochrome b/c subunit.
    
 
 0.703
qcrB
Menaquinol-cytochrome c oxidoreductase, cytochrome b subunit.
    
   0.698
MCCL_0383
FAD-dependent pyridine nucleotide-disulphide oxidoreductase homolog; Belongs to the sulfur carrier protein TusA family.
  
  
 0.623
sbcD
Conserved hypothetical protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
  
   0.597
MCCL_1561
Conserved hypothetical protein; Similar to functionally unknown protein.
  
   0.597
MCCL_0090
Short-chain dehydrogenase/reductase family protein.
 
   0.552
mnhA
Na+/H+ antiporter MnhA subunit.
  
  
 0.517
MCCL_0257
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.507
MCCL_0624
Na+/H+ antiporter protein.
   
 
 0.506
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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