STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0281Sensor histidine kinase. (298 aa)    
Predicted Functional Partners:
MCCL_0280
Two-component response regulator.
 0.999
MCCL_0283
Conserved hypothetical protein; Similar to ABC transporter, permease protein.
 
 
 0.994
MCCL_0282
ABC transporter ATP-binding protein.
 
 
 0.929
phoP
Alkaline phosphatase synthesis transcriptional regulatory protein.
 
 0.888
MCCL_1701
Conserved hypothetical protein; Similar to two-component response regulator.
 
 
 0.857
ctaC
Cytochrome c oxidase polypeptide II precursor (Cytochrome aa3 subunit 2) homolog; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 
 0.833
MCCL_0088
Conserved hypothetical protein; Similar to two-component response regulator.
 
 0.825
MCCL_1066
Response regulator ArlR homolog.
 
 0.816
MCCL_1138
Response regulator protein.
 
 0.797
MCCL_0021
DNA-binding response regulator.
 
 0.795
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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