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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0294Conserved hypothetical protein; Similar to two-component response regulator. (192 aa)    
Predicted Functional Partners:
MCCL_0293
Conserved hypothetical protein; Similar to sensor histidine kinase.
 0.998
MCCL_1571
Signal transduction histidine kinase.
 
 
 0.936
MCCL_0292
ABC-type transport system permease component.
 
     0.921
MCCL_0291
ABC-type transport system ATPase component.
    0.869
nreB
Two-component sensor histidine kinase of nitrate reduction operon.
 
 
 0.868
vraS
Two-component sensor histidine kinase VraS homolog.
 
 
 0.867
nreC
Two-component response regulator NreC.
  
     0.774
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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