STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0310Conserved hypothetical protein; Similar to UTP--glucose-1-phosphate uridylyltransferase. (392 aa)    
Predicted Functional Partners:
MCCL_0309
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.775
MCCL_1311
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.580
MCCL_1785
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.511
MCCL_0639
Conserved hypothetical protein; Similar to DNA-binding protein; Belongs to the sigma-70 factor family.
  
     0.461
MCCL_0308
Hypothetical protein.
       0.454
MCCL_0429
Conserved hypothetical protein; Similar to major facilitator superfamily protein.
  
     0.440
MCCL_1560
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.432
MCCL_0400
Lipase LipA homolog.
  
 
   0.424
tpi
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.417
MCCL_0514
Conserved hypothetical protein; Similar to functionally unknown protein.
  
 
   0.406
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.