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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0311Conserved hypothetical protein; Similar to functionally unknown protein. (305 aa)    
Predicted Functional Partners:
MCCL_0179
Conserved hypothetical protein; Similar to cation multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.936
MCCL_0087
Conserved hypothetical protein; Similar to ABC transporter, permease protein.
  
 
 0.881
MCCL_0086
ABC transporter, ATP-binding protein homolog.
  
 
 0.626
MCCL_0114
ABC transporter ATP-binding protein.
  
 
 0.626
MCCL_0282
ABC transporter ATP-binding protein.
  
 
 0.626
MCCL_0312
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.439
MCCL_1156
Conserved hypothetical protein; Similar to transcriptional regulator, AraC family.
   
  
 0.416
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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