STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0318Arginase homolog; Belongs to the arginase family. (301 aa)    
Predicted Functional Partners:
rocD
Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde.
 0.987
MCCL_1661
Conserved hypothetical protein; Similar to lysine decarboxylase.
   
 0.962
MCCL_1651
Conserved hypothetical protein; Similar to nitric-oxide synthase.
     
  0.900
argH
Argininosuccinate lyase.
     
 0.816
MCCL_0582
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.567
hutG
Conserved hypothetical protein; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
  
     0.519
pyrB
Aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
  0.499
hutH
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
  
  
 0.490
MCCL_1451
Conserved hypothetical protein; Similar to proline dehydrogenase.
 
  
 0.483
MCCL_0319
Cation efflux family protein.
       0.480
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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