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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0339Conserved hypothetical protein; Similar to lactose phosphotransferase system repressor. (238 aa)    
Predicted Functional Partners:
fruB
Fructose specific permease.
 
  
 0.930
fruA
Fructose 1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.895
MCCL_0338
Conserved hypothetical protein; Similar to phosphohydrolases, Icc family.
  
    0.782
MCCL_0277
Sugar-binding transcriptional regulator LacI family protein.
  
   
 0.517
MCCL_0348
Conserved hypothetical protein; Similar to transcriptional repressor of ribose operon.
  
   
 0.511
MCCL_0337
Conserved hypothetical protein; Similar to RNA-directed DNA polymerase.
       0.508
MCCL_0356
Conserved hypothetical protein; Similar to transcriptional regulator.
  
   
 0.504
ccpA
Catabolite control protein A.
  
   
 0.491
MCCL_0340
ABC transporter, substrate-binding protein.
       0.487
MCCL_0344
Conserved hypothetical protein; Similar to histidinol-phosphatase; Belongs to the PHP hydrolase family. HisK subfamily.
 
     0.467
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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