Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MCCL_0342Conserved hypothetical protein; Similar to ABC transporter, permease protein. (264 aa)    
Predicted Functional Partners:
MCCL_0341
ABC transporter, permease protein.
 
  0.998
MCCL_0343
Conserved hypothetical protein; Similar to ABC transporter, ATP-binding protein.
 
 0.998
MCCL_0340
ABC transporter, substrate-binding protein.
  
 0.997
potB
Spermidine/putrescine ABC transporter permease protein.
 
 
 0.919
potD
Spermidine/putrescine-binding protein.
 
 
 0.918
MCCL_0344
Conserved hypothetical protein; Similar to histidinol-phosphatase; Belongs to the PHP hydrolase family. HisK subfamily.
 
     0.801
potA
Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 0.793
MCCL_0338
Conserved hypothetical protein; Similar to phosphohydrolases, Icc family.
 
     0.504
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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