close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0351Conserved hypothetical protein; Converts alpha-aldose to the beta-anomer. (322 aa)    
Predicted Functional Partners:
MCCL_1191
Conserved hypothetical protein; Similar to functionally unknown protein.
 
 
 0.937
MCCL_0350
Hypothetical protein; Belongs to the RbsD / FucU family.
 
  
 0.859
MCCL_0348
Conserved hypothetical protein; Similar to transcriptional repressor of ribose operon.
 
   
 0.811
rbsK
Ribokinase homolog; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
  
 0.778
MCCL_1655
Conserved hypothetical protein; Similar to oxidoreductase.
 
  
 0.480
MCCL_0656
NAD dependent epimerase/dehydratase family protein homolog.
 
    
 0.474
MCCL_1768
Ribose 5-phosphate isomerase homolog.
  
  
 0.455
MCCL_0278
Sugar-specific permease EIIA 1 domain.
  
  
 0.450
glcB
Glucose-specific PTS system IIABC component.
  
  
 0.450
MCCL_0347
Conserved hypothetical protein; Similar to transcriptional regulator, XRE family.
  
    0.427
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.