STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0368Conserved hypothetical protein; Similar to truncated Mn2+/Fe2+ transporter. (336 aa)    
Predicted Functional Partners:
MCCL_0094
ABC transporter permease protein homolog.
   
  
 0.823
MCCL_0095
Conserved hypothetical protein; Similar to ABC transporter ATP-binding protein.
  
  
 0.777
MCCL_0093
ABC transporter extracellular binding protein homolog; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.676
MCCL_0096
Iron-dependent repressor homolog.
 
  
 0.549
MCCL_0432
Conserved hypothetical protein; Similar to sodium/hydrogen exchanger family protein.
 
     0.522
MCCL_0722
Conserved hypothetical protein; Similar to functionally unknown protein; Belongs to the UPF0637 family.
 
     0.462
mreB
ABC transport system permease component MreB.
   
  
 0.461
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
     
 0.456
arsC
Arsenate reductase; Catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)].
      
 0.453
trxB
Thioredoxin reductase.
   
  
 0.447
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.