STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0371SN-glycerol-3-phosphate transport ATP-binding protein ugpC homolog; Belongs to the ABC transporter superfamily. (358 aa)    
Predicted Functional Partners:
MCCL_0354
Multiple sugar-binding transport system, permease protein homolog.
 
 
 0.973
MCCL_0355
Multiple sugar-binding transporter, permease protein homolog.
 
 
 0.954
MCCL_0353
Multiple sugar-binding transport system, binding protein homolog.
 
 
 0.856
MCCL_0370
Glycerol-3-phosphate transporter.
       0.693
MCCL_0372
Conserved hypothetical protein; Similar to transcriptional regulator.
 
  
 0.648
MCCL_0278
Sugar-specific permease EIIA 1 domain.
   
 
 0.604
glcB
Glucose-specific PTS system IIABC component.
   
 
 0.604
MCCL_0375
PTS system, trehalose-specific enzyme II, BC component.
  
  
 0.525
MCCL_0374
Conserved hypothetical protein; Similar to fructokinase.
  
  
 0.487
MCCL_1201
Conserved hypothetical protein; Similar to functionally unknown protein.
  
    0.478
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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