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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0372Conserved hypothetical protein; Similar to transcriptional regulator. (322 aa)    
Predicted Functional Partners:
MCCL_0374
Conserved hypothetical protein; Similar to fructokinase.
 
  
 0.849
MCCL_0373
Sucrose-6-phosphate hydrolase homolog; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.756
MCCL_0375
PTS system, trehalose-specific enzyme II, BC component.
 
  
 0.680
MCCL_0371
SN-glycerol-3-phosphate transport ATP-binding protein ugpC homolog; Belongs to the ABC transporter superfamily.
 
  
 0.648
pykA
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.622
ptsH
Phosphocarrier protein HPr.
   
 
 0.564
MCCL_0370
Glycerol-3-phosphate transporter.
     
 0.538
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
   
   0.508
MCCL_1936
GntR family regulatory protein homolog.
  
   
 0.508
rbsK
Ribokinase homolog; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.499
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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