STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0380Conserved hypothetical protein; Similar to functionally unknown protein. (135 aa)    
Predicted Functional Partners:
MCCL_0081
Conserved hypothetical protein; Similar to pyridoxamine 5'-phosphate oxidase.
   
    0.608
MCCL_0381
Conserved hypothetical protein; Similar to p-aminobenzoyl-glutamate transporter.
 
     0.557
MCCL_0585
NADH-dependent butanol dehydrogenase homolog.
   
    0.457
MCCL_0478
Conserved hypothetical protein; Similar to proton-dependent oligopeptide transport protein homologue.
   
    0.437
MCCL_0479
Di-tripeptide permease homolog.
   
    0.437
MCCL_1460
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.432
MCCL_1595
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.426
MCCL_1616
Conserved hypothetical protein; Similar to functionally unknown protein.
  
    0.408
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.