STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0396Conserved hypothetical protein; Similar to functionally unknown protein. (168 aa)    
Predicted Functional Partners:
phnA
Alkylphosphonate utilization operon protein PhnA.
       0.579
MCCL_0395
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.578
MCCL_0392
Conserved hypothetical protein; Similar to acetyltransferase, GNAT family protein.
       0.537
MCCL_0393
Conserved hypothetical protein; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
       0.537
MCCL_0166
ABC-type cobalamin Fe3+-siderophores transport system ATPase component.
       0.403
fhuB
Ferrichrome transport permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.403
MCCL_0168
Cobalamin Fe3+-siderophores ABC transporter permease homolog; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.403
MCCL_0399
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.403
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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