STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0440Conserved hypothetical protein; Similar to acetyltransferase, GNAT family. (175 aa)    
Predicted Functional Partners:
MCCL_0441
Conserved hypothetical protein; Similar to functionally unknown protein.
 
    0.838
MCCL_0439
Conserved hypothetical protein; Similar to secreted metal-dependent protease.
  
    0.767
MCCL_0438
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.727
MCCL_0442
Conserved hypothetical protein; Similar to acetyltransferase, GNAT family.
       0.642
MCCL_0272
Conserved hypothetical protein; Similar to acetyltransferase family protein.
  
   
 0.535
MCCL_1067
Conserved hypothetical protein; Similar to acetyltransferase, GNAT family.
  
   
 0.511
MCCL_1724
Conserved hypothetical protein; Acetylates the N-terminal alanine of ribosomal protein S18.
  
 
 0.458
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.424
MCCL_0856
Spermidine acetyltransferase.
      
 0.422
MCCL_1025
Conserved hypothetical protein; Similar to functionally unknown protein.
 
 
   0.407
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.