STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0441Conserved hypothetical protein; Similar to functionally unknown protein. (158 aa)    
Predicted Functional Partners:
MCCL_1897
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase homolog.
 
      0.851
MCCL_0440
Conserved hypothetical protein; Similar to acetyltransferase, GNAT family.
 
    0.838
MCCL_0439
Conserved hypothetical protein; Similar to secreted metal-dependent protease.
       0.763
MCCL_0438
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.727
ddl
D-alanine-D-alanine ligase; Cell wall formation.
 
    0.672
MCCL_0442
Conserved hypothetical protein; Similar to acetyltransferase, GNAT family.
  
    0.661
MCCL_1784
Spermine/spermidine acetyltransferase blt homolog.
  
  
 0.598
thiI
Conserved hypothetical protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
 
     0.401
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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