STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0470Conserved hypothetical protein; Similar to divalent heavy-metal cations transporter. (271 aa)    
Predicted Functional Partners:
MCCL_0471
ABC transporter ATP-binding protein homolog.
       0.709
recQ
ATP-dependent DNA helicase RecQ.
  
    0.709
MCCL_0474
ABC-type transporter periplasmic glycine betaine choline-binding protein homolog.
       0.527
MCCL_0999
Holocytochrome C synthase.
   
    0.519
MCCL_0473
ABC transporter ATP-binding protein homolog.
       0.496
MCCL_0068
Conserved hypothetical protein; Similar to cell-division inhibitor.
  
    0.475
sodA
Superoxide dismutase SodA; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
    0.475
MCCL_0319
Cation efflux family protein.
   
 0.473
mreA
ABC transport system ATPase component MreA.
   
  
 0.437
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II homolog; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
      
 0.422
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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