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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0476Conserved hypothetical protein; Similar to 5'(3')-deoxyribonucleotidase. (177 aa)    
Predicted Functional Partners:
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.636
MCCL_1475
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.610
MCCL_0474
ABC-type transporter periplasmic glycine betaine choline-binding protein homolog.
       0.484
MCCL_0473
ABC transporter ATP-binding protein homolog.
       0.472
recQ
ATP-dependent DNA helicase RecQ.
       0.433
MCCL_0826
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.424
MCCL_1786
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.416
MCCL_0169
Hypothetical protein.
  
     0.413
MCCL_0408
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.408
MCCL_1351
Conserved hypothetical protein; Similar to Lipolytic enzyme, G-D-S-L.
  
    0.404
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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