STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0490Conserved hypothetical protein; Similar to glycerate kinase. (355 aa)    
Predicted Functional Partners:
pgm
2,3-diphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
  
 0.919
MCCL_0057
Dehydrogenase family protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.914
aldA
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.901
MCCL_1656
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.901
MCCL_0489
Conserved hypothetical protein; Similar to functionally unknown protein.
     
 0.620
MCCL_0407
Gluconate permease.
 
  
 0.571
fruB
Fructose specific permease.
  
    0.465
MCCL_0404
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.457
MCCL_0191
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.441
MCCL_0962
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.432
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.