STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0505Conserved hypothetical protein; Similar to invasion-associated protein p60. (327 aa)    
Predicted Functional Partners:
MCCL_1517
Conserved hypothetical protein; Similar to phage tail fiber protein.
 
  
 0.771
MCCL_0975
Hypothetical protein.
 
  
0.767
metS
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
     
 0.606
MCCL_0974
Hypothetical protein.
 
   
 0.554
MCCL_0802
Conserved hypothetical protein; Similar to protein kinase.
  
  
 0.547
MCCL_0506
Conserved hypothetical protein; Similar to secretory antigen precursor SsaA.
 
   
 0.540
MCCL_0667
Hypothetical protein.
 
  
 0.526
MCCL_0664
Hypothetical protein.
 
  
 0.513
dinG
Conserved hypothetical protein; 3'-5' exonuclease.
 
   
 0.497
MCCL_0507
Hypothetical protein.
 
 
   0.484
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.