STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0506Conserved hypothetical protein; Similar to secretory antigen precursor SsaA. (146 aa)    
Predicted Functional Partners:
MCCL_1565
Conserved hypothetical protein; Similar to DNA-binding protein.
  
     0.652
MCCL_0401
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.638
femB
Methicillin resistance protein FemB.
 
     0.636
femA
Methicillin resistance protein FemA.
 
     0.623
MCCL_0128
Lysostaphin immunity factor FmhA homolog.
 
     0.618
MCCL_0514
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.607
MCCL_0429
Conserved hypothetical protein; Similar to major facilitator superfamily protein.
  
     0.595
MCCL_0709
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.584
MCCL_0176
FmhB protein, methicillin resistant factor homolog.
  
     0.569
MCCL_0015
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.556
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.