STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0537Conserved hypothetical protein; Similar to functionally unknown protein. (129 aa)    
Predicted Functional Partners:
MCCL_0538
Conserved hypothetical protein; Similar to thioredoxin.
  
    0.863
MCCL_1845
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.677
gcvH
Glycine cleavage system H protein; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family.
       0.623
metN-2
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
       0.592
MCCL_0540
ABC transporter, permease protein.
       0.592
MCCL_1826
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.549
MCCL_0872
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.494
MCCL_0489
Conserved hypothetical protein; Similar to functionally unknown protein.
 
     0.483
MCCL_0535
Conserved hypothetical protein; Similar to arsenate reductase; Belongs to the ArsC family.
       0.481
MCCL_1846
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.427
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.