STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metN-2ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (342 aa)    
Predicted Functional Partners:
MCCL_0540
ABC transporter, permease protein.
 
 0.998
MCCL_0541
ABC transporter, substrate-binding protein; Belongs to the nlpA lipoprotein family.
 
 0.994
MCCL_0418
ABC transporter, permease protein homolog.
 
 0.991
MCCL_0254
Conserved hypothetical protein; Similar to ABC transporter substrate-binding protein; Belongs to the nlpA lipoprotein family.
 
 0.988
MCCL_0419
ABC transporter, substrate-binding protein homolog; Belongs to the nlpA lipoprotein family.
 
 0.987
metN
ABC transporter, ATP-binding protein homolog; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
  
  
 
0.905
MCCL_0105
Conserved hypothetical protein; Similar to ABC transporter ATP-binding protein.
 
    
0.738
MCCL_0538
Conserved hypothetical protein; Similar to thioredoxin.
       0.636
MCCL_0537
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.592
MCCL_1291
ABC transporter, ATP-binding protein and permease homolog.
 
     
0.588
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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