STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0541ABC transporter, substrate-binding protein; Belongs to the nlpA lipoprotein family. (274 aa)    
Predicted Functional Partners:
MCCL_0540
ABC transporter, permease protein.
 0.996
metN-2
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.994
MCCL_0418
ABC transporter, permease protein homolog.
 0.991
metN
ABC transporter, ATP-binding protein homolog; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.987
MCCL_0419
ABC transporter, substrate-binding protein homolog; Belongs to the nlpA lipoprotein family.
  
  
 
0.921
MCCL_0254
Conserved hypothetical protein; Similar to ABC transporter substrate-binding protein; Belongs to the nlpA lipoprotein family.
  
  
 
0.903
MCCL_0542
ABC transporter, ATP-binding protein involved in Fe-S cluster formation YurY.
       0.468
MCCL_0538
Conserved hypothetical protein; Similar to thioredoxin.
   
   0.467
MCCL_0060
O-acetylhomoserine (thiol)-lyase homolog.
  
    0.462
MCCL_1584
Glutamine-binding periplasmic protein homolog.
  
 
 0.426
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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