STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0549Conserved hypothetical protein; Similar to amino acid ABC transporter ATP-binding protein. (238 aa)    
Predicted Functional Partners:
MCCL_1292
ABC transporter, ATP-binding protein and permease homolog.
   
0.907
MCCL_0133
Iron compound ABC transporter binding protein homolog.
  
 
 0.861
oppD
Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
     
0.856
MCCL_0548
Conserved hypothetical protein; Similar to functionally unknown protein.
 
    0.823
fhuB
Ferrichrome transport permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.783
MCCL_0168
Cobalamin Fe3+-siderophores ABC transporter permease homolog; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.783
MCCL_1822
Conserved hypothetical protein; Similar to iron compound ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.783
MCCL_0003
Na+ efflux pump, ATP-binding protein.
 
    
0.628
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.610
MCCL_1823
Conserved hypothetical protein; Similar to iron compound ABC transporter periplasmic component.
  
 
 0.589
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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