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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0566Conserved hypothetical protein; Similar to pyridine nucleotide-disulphide oxidoreductase. (408 aa)    
Predicted Functional Partners:
MCCL_0564
NADH dehydrogenase FAD-containing subunit homolog.
 
  
 
0.927
MCCL_0383
FAD-dependent pyridine nucleotide-disulphide oxidoreductase homolog; Belongs to the sulfur carrier protein TusA family.
 
  
0.692
MCCL_0568
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.581
cyoB
Cytochrome D ubiquinol oxidase subunit I.
 
   
 0.581
MCCL_0567
Conserved hypothetical protein; Similar to mutT/nudix family protein; Belongs to the Nudix hydrolase family.
       0.580
MCCL_0565
Conserved hypothetical protein; Similar to functionally unknown protein; Belongs to the HesB/IscA family.
  
    0.559
MCCL_0569
Hypothetical protein.
       0.520
menA
1,4-dihydroxy-2-naphthodate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
 
    0.487
ctaC
Cytochrome c oxidase polypeptide II precursor (Cytochrome aa3 subunit 2) homolog; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
  
 0.483
MCCL_0571
Conserved hypothetical protein; Similar to ComA2 family protein.
       0.454
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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