STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0589Conserved hypothetical protein; Similar to functionally unknown protein. (188 aa)    
Predicted Functional Partners:
MCCL_0590
type-I signal peptidase SipB homolog; Belongs to the peptidase S26 family.
  
  
 0.730
MCCL_0591
ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.
 
     0.634
MCCL_1110
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.584
pgi
Glucose-6-phosphate isomerase A; Belongs to the GPI family.
       0.581
MCCL_0592
Conserved hypothetical protein; ATP-dependent DNA helicase.
       0.562
MCCL_0595
Conserved hypothetical protein; Similar to functionally unknown protein.
 
     0.552
MCCL_1546
Conserved hypothetical protein; Similar to competence transcription factor.
 
     0.542
MCCL_1420
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.538
MCCL_0642
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.536
MCCL_1466
Conserved hypothetical protein; Similar to glucosaminidase.
  
     0.528
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.