STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0594Fumarylacetoacetate hydrolase family protein. (299 aa)    
Predicted Functional Partners:
MCCL_0592
Conserved hypothetical protein; ATP-dependent DNA helicase.
  
    0.635
MCCL_0591
ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.
       0.610
MCCL_0595
Conserved hypothetical protein; Similar to functionally unknown protein.
       0.593
MCCL_0593
Hypothetical protein.
       0.561
MCCL_0589
Conserved hypothetical protein; Similar to functionally unknown protein.
 
     0.474
MCCL_0590
type-I signal peptidase SipB homolog; Belongs to the peptidase S26 family.
       0.463
MCCL_1697
Conserved hypothetical protein; Similar to aryldialkylphosphatase related protein.
     0.461
citZ
Citrate synthase II; Belongs to the citrate synthase family.
  
    0.407
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.