STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_0643Conserved hypothetical protein; Similar to bifunctional autolysin with amidase and hexosaminidase. (1217 aa)    
Predicted Functional Partners:
MCCL_0975
Hypothetical protein.
 
  
 0.818
MCCL_0103
Conserved hypothetical protein; Similar to functionally unknown protein.
  
    0.746
MCCL_1310
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.746
MCCL_1652
Conserved hypothetical protein; Similar to functionally unknown protein.
 
     0.743
MCCL_0102
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.730
MCCL_0709
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.719
MCCL_0188
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.715
MCCL_1716
Hypothetical protein.
  
    0.712
MCCL_1602
Conserved hypothetical protein; Similar to teichoic acid translocation ATP-binding protein TagH.
 
    0.711
MCCL_0015
Conserved hypothetical protein; Similar to functionally unknown protein.
  
     0.710
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.